An R object containing formatted results from a genome-wide association study (GWAS) of interleukin-6 levels (GCST90274815) and linkage disequilibrium statistics from 1000 Genomes Phase 3 for the region 1:154301970-154551970.
Format
A list containing 2 objects with the information necessary
for constructing an interactive regional plot.
Specifically, this includes the following information:
assocadata.framewith genetic association results for interleukin-6 levels from GCST90274815 for the region 1:154301970-154551970corramatrixof Pearson correlation statistics (not squared) from the European samples of 1000 Genomes Phase 3 for the region 1:154301970-154551970, thismatrixhas the same markers in the same order asassoc
Details
assoc is a data.frame with the following columns:
markerthe genomic marker identifier (i.e. rsID or chromosome-position)chrthe chromosome for each genomic markerposthe genomic position (GRCh37) for each genomic markerpvaluethe association p-value for each genomic marker
Examples
head(geni_test_region$assoc)
#> marker chr pos pvalue
#> 1 rs6691345 1 154302826 7.56e-06
#> 2 rs115165870 1 154303228 8.76e-03
#> 3 rs12727865 1 154303705 5.47e-02
#> 4 rs147889978 1 154303783 1.21e-01
#> 5 rs6702754 1 154303976 5.58e-02
#> 6 rs1209264 1 154305010 4.01e-02
head(geni_test_region$corr)
#> rs6691345 rs115165870 rs12727865 rs147889978 rs6702754 rs1209264
#> rs6691345 1.0000 -0.0514 -0.2433 -0.0477 -0.2433 0.1543
#> rs115165870 -0.0514 1.0000 -0.1444 0.0348 -0.1444 0.0528
#> rs12727865 -0.2433 -0.1444 1.0000 0.2230 1.0000 0.1941
#> rs147889978 -0.0477 0.0348 0.2230 1.0000 0.2230 0.0687
#> rs6702754 -0.2433 -0.1444 1.0000 0.2230 1.0000 0.1941
#> rs1209264 0.1543 0.0528 0.1941 0.0687 0.1941 1.0000
#> rs12077870 rs6427575 1:154305812:G:GA rs28409746 1:154305979:C:CA
#> rs6691345 -0.2433 1.0000 -0.1350 -0.3340 0.5819
#> rs115165870 -0.1444 -0.0514 -0.1204 0.1973 -0.0887
#> rs12727865 1.0000 -0.2433 0.6083 -0.6323 0.3449
#> rs147889978 0.2230 -0.0477 -0.1010 -0.1296 0.2605
#> rs6702754 1.0000 -0.2433 0.6083 -0.6323 0.3449
#> rs1209264 0.1941 0.1543 0.1243 0.3378 0.2122
#> 1:154306119:CTTTT:C rs2483710 1:154306330:C:CA rs56699544
#> rs6691345 0.1543 0.2148 -0.3340 -0.3340
#> rs115165870 0.0528 0.1335 0.1973 0.1973
#> rs12727865 0.1941 -0.3621 -0.6323 -0.6323
#> rs147889978 0.0687 0.1288 -0.1296 -0.1296
#> rs6702754 0.1941 -0.3621 -0.6323 -0.6323
#> rs1209264 1.0000 0.5946 0.3378 0.3378
#> rs11586379 rs1760796 rs150779199 rs34880256 1:154308212:T:TA
#> rs6691345 0.5858 0.2148 -0.0286 -0.1331 -0.1342
#> rs115165870 -0.0883 0.1335 -0.0037 -0.1195 -0.1248
#> rs12727865 0.3481 -0.3621 0.1921 0.6132 0.6032
#> rs147889978 0.2723 0.1288 0.7298 -0.1001 -0.1052
#> rs6702754 0.3481 -0.3621 0.1921 0.6132 0.6032
#> rs1209264 0.2111 0.5946 0.0665 0.1225 0.1223
#> rs2633438 1:154308517:C:CA rs2988721 rs9787014 1:154308927:G:GA
#> rs6691345 0.2148 -0.1620 0.2148 -0.1331 0.1583
#> rs115165870 0.1335 -0.0698 0.1335 -0.1195 0.0549
#> rs12727865 -0.3621 0.6186 -0.3621 0.6132 0.1877
#> rs147889978 0.1288 0.3488 0.1288 -0.1001 0.0706
#> rs6702754 -0.3621 0.6186 -0.3621 0.6132 0.1877
#> rs1209264 0.5946 0.0910 0.5946 0.1225 0.9895
#> 1:154308959:ATTT:A rs34870927 1:154309270:CTT:C rs6427576
#> rs6691345 -0.3381 -0.3340 0.4990 0.5858
#> rs115165870 0.1596 0.1973 -0.1226 -0.0883
#> rs12727865 -0.3855 -0.6323 0.5836 0.3481
#> rs147889978 -0.0007 -0.1296 0.2167 0.2723
#> rs6702754 -0.3855 -0.6323 0.5836 0.3481
#> rs1209264 0.2194 0.3378 0.2366 0.2111
#> 1:154309437:A:AT rs2483711 rs2481064 rs68062313 rs1760795
#> rs6691345 -0.1331 0.2148 0.2148 0.1690 -0.3340
#> rs115165870 -0.1195 0.1335 0.1335 0.0838 0.1973
#> rs12727865 0.6132 -0.3621 -0.3621 0.0031 -0.6323
#> rs147889978 -0.1001 0.1288 0.1288 0.0963 -0.1296
#> rs6702754 0.6132 -0.3621 -0.3621 0.0031 -0.6323
#> rs1209264 0.1225 0.5946 0.5946 0.8455 0.3378
#> 1:154310223:G:GA rs767804 rs1352333 1:154310833:TA:T rs7515370
#> rs6691345 0.5819 1.0000 0.2148 -0.3340 0.5858
#> rs115165870 -0.0757 -0.0514 0.1335 0.1973 -0.0883
#> rs12727865 0.3449 -0.2433 -0.3621 -0.6323 0.3481
#> rs147889978 0.2605 -0.0477 0.1288 -0.1296 0.2723
#> rs6702754 0.3449 -0.2433 -0.3621 -0.6323 0.3481
#> rs1209264 0.2122 0.1543 0.5946 0.3378 0.2111
#> rs1626035 rs1760794 rs2481065 1:154312136:AAG:A rs1194588
#> rs6691345 0.2148 -0.3340 0.1543 0.0086 -0.5819
#> rs115165870 0.1335 0.1973 0.0528 -0.0390 0.0887
#> rs12727865 -0.3621 -0.6323 0.1941 0.1486 -0.3498
#> rs147889978 0.1288 -0.1296 0.0687 -0.0383 -0.2736
#> rs6702754 -0.3621 -0.6323 0.1941 0.1486 -0.3498
#> rs1209264 0.5946 0.3378 1.0000 0.0421 -0.2048
#> rs34968830 rs35463210 rs2010828 rs749966 rs2274988 rs77993403
#> rs6691345 -0.1350 -0.2142 1.0000 -0.1331 -0.2142 -0.1072
#> rs115165870 -0.1204 -0.1333 -0.0514 -0.1195 -0.1333 -0.0453
#> rs12727865 0.6083 0.3621 -0.2433 0.6132 0.3621 -0.1167
#> rs147889978 -0.1010 -0.1286 -0.0477 -0.1001 -0.1286 -0.0436
#> rs6702754 0.6083 0.3621 -0.2433 0.6132 0.3621 -0.1167
#> rs1209264 0.1243 -0.5918 0.1543 0.1225 -0.5918 0.0580
#> rs1194587 rs1194586 rs1979575 rs1194585 rs11809740 rs1194584
#> rs6691345 -0.3340 -0.3340 -0.1709 -0.3340 -0.2142 -0.3361
#> rs115165870 0.1973 0.1973 -0.0619 0.1973 -0.1333 0.1969
#> rs12727865 -0.6323 -0.6323 0.6380 -0.6323 0.3621 -0.6317
#> rs147889978 -0.1296 -0.1296 0.3731 -0.1296 -0.1286 -0.1306
#> rs6702754 -0.6323 -0.6323 0.6380 -0.6323 0.3621 -0.6317
#> rs1209264 0.3378 0.3378 0.1204 0.3378 -0.5918 0.3332
#> rs148299382 rs1194583 1:154320414:CA:C rs2297607 rs2297606
#> rs6691345 -0.1503 -0.9953 -0.4769 -0.1969 -0.2168
#> rs115165870 -0.0507 0.0524 0.1152 -0.1220 -0.1474
#> rs12727865 -0.1933 0.2402 -0.2347 0.3081 0.4013
#> rs147889978 -0.0667 0.0487 -0.2303 -0.1039 -0.1294
#> rs6702754 -0.1933 0.2402 -0.2347 0.3081 0.4013
#> rs1209264 -0.9894 -0.1460 -0.2334 -0.6123 -0.4996
#> rs41310887 rs12729561 rs3811452 rs17699328 1:154323548:AT:A
#> rs6691345 -0.0828 -0.1412 -0.1331 1.0000 -0.3320
#> rs115165870 -0.0714 -0.1121 -0.1195 -0.0514 0.1977
#> rs12727865 -0.1333 0.5870 0.6132 -0.2433 -0.6328
#> rs147889978 -0.0086 -0.0924 -0.1001 -0.0477 -0.1287
#> rs6702754 -0.1333 0.5870 0.6132 -0.2433 -0.6328
#> rs1209264 0.0662 0.1152 0.1225 0.1543 0.3294
#> rs11589949 rs80282309 rs1194592 1:154324553:TA:T rs1552483
#> rs6691345 -0.1709 -0.0805 -0.3265 0.4219 0.1598
#> rs115165870 -0.0619 -0.0390 0.1952 -0.1459 0.0647
#> rs12727865 0.6380 0.1486 -0.6220 0.1898 -0.6244
#> rs147889978 0.3731 -0.0383 -0.1319 -0.1384 -0.3689
#> rs6702754 0.6380 0.1486 -0.6220 0.1898 -0.6244
#> rs1209264 0.1204 0.0421 0.3131 -0.4071 -0.1080
#> rs2483712 rs1194589 rs35735180 rs4040747 rs6688376 rs1889312
#> rs6691345 -0.3216 0.1586 -0.1375 0.9321 -0.1981 0.4458
#> rs115165870 0.1960 -0.3229 0.3391 -0.0425 0.2327 0.1816
#> rs12727865 -0.6201 -0.5207 0.4867 -0.2410 0.7632 0.5231
#> rs147889978 -0.1324 -0.3635 0.3801 -0.0385 0.2833 0.2299
#> rs6702754 -0.6201 -0.5207 0.4867 -0.2410 0.7632 0.5231
#> rs1209264 0.3209 -0.1273 0.1245 0.1684 0.1941 0.2871
#> 1:154326743:AACCTCTGCTCTGGGGCC:A rs11576151
#> rs6691345 0.9321 0.9035
#> rs115165870 -0.0425 -0.0471
#> rs12727865 -0.2410 -0.2183
#> rs147889978 -0.0385 -0.0431
#> rs6702754 -0.2410 -0.2183
#> rs1209264 0.1684 0.1755
#> 1:154327695:AACACACACACACACACAC:A rs140907814 rs72633645 rs11265593
#> rs6691345 -0.6129 0.1349 0.8672 0.5624
#> rs115165870 0.1271 -0.0114 -0.0540 -0.1364
#> rs12727865 -0.1741 -0.0591 -0.1871 0.3394
#> rs147889978 0.1084 -0.0098 -0.0500 -0.1180
#> rs6702754 -0.1741 -0.0591 -0.1871 0.3394
#> rs1209264 -0.2015 0.0765 0.1858 0.2411
#> rs11265594 rs10908831 rs6686467 rs7555891 1:154329854:GTAAA:G
#> rs6691345 -0.1369 -0.3042 0.8709 0.5624 0.8709
#> rs115165870 -0.1212 -0.1171 -0.0531 -0.1364 -0.0531
#> rs12727865 0.6096 -0.5663 -0.1834 0.3394 -0.1834
#> rs147889978 -0.1018 -0.1448 -0.0490 -0.1180 -0.0490
#> rs6702754 0.6096 -0.5663 -0.1834 0.3394 -0.1834
#> rs1209264 0.1260 0.2965 0.1842 0.2411 0.1842
#> rs10218433 rs35229198 rs139384492 rs11576181 rs12143987 rs11576193
#> rs6691345 0.5624 -0.1388 -0.1236 0.5624 -0.5597 0.5638
#> rs115165870 -0.1364 -0.1220 -0.0160 -0.1364 0.1357 -0.1355
#> rs12727865 0.3394 0.6047 -0.1387 0.3394 -0.3378 0.3375
#> rs147889978 -0.1180 -0.1027 -0.0588 -0.1180 0.1175 -0.1172
#> rs6702754 0.3394 0.6047 -0.1387 0.3394 -0.3378 0.3375
#> rs1209264 0.2411 0.1187 -0.7948 0.2411 -0.2328 0.2395
#> 1:154330810:C:CT rs11590941 rs4414034 rs145030659 rs1073907
#> rs6691345 -0.1657 0.5128 -0.1302 0.1349 0.5624
#> rs115165870 0.2820 -0.0646 -0.1220 -0.0114 -0.1364
#> rs12727865 0.3718 -0.1214 0.6047 -0.0591 0.3394
#> rs147889978 0.2928 -0.0303 -0.1027 -0.0098 -0.1180
#> rs6702754 0.3718 -0.1214 0.6047 -0.0591 0.3394
#> rs1209264 -0.1542 0.0849 0.1277 0.0765 0.2411
#> rs6698881 rs6696089 1:154332918:G:GT rs138273059 1:154333193:TC:T
#> rs6691345 0.8709 0.5624 0.5584 -0.0286 -0.3418
#> rs115165870 -0.0531 -0.1364 -0.1375 -0.0037 -0.1536
#> rs12727865 -0.1834 0.3394 0.3327 0.1921 -0.3886
#> rs147889978 -0.0490 -0.1180 -0.1189 0.7298 -0.1801
#> rs6702754 -0.1834 0.3394 0.3327 0.1921 -0.3886
#> rs1209264 0.1842 0.2411 0.2430 0.0665 0.3187
#> rs11577266 rs11590203 rs144063783 1:154333628:G:GCATGGT rs61803410
#> rs6691345 0.5624 0.8709 -0.0273 0.5650 0.5650
#> rs115165870 -0.1364 -0.0531 0.0126 -0.1366 -0.1366
#> rs12727865 0.3394 -0.1834 -0.0739 0.3349 0.3349
#> rs147889978 -0.1180 -0.0490 -0.0401 -0.1183 -0.1183
#> rs6702754 0.3394 -0.1834 -0.0739 0.3349 0.3349
#> rs1209264 0.2411 0.1842 0.0768 0.2416 0.2416
#> rs6687939 rs6687971 rs1948143 rs72633646 rs12118634 rs150550224
#> rs6691345 -0.1878 -0.1878 -0.1379 0.8709 -0.5585 0.1349
#> rs115165870 0.3114 0.3114 -0.1179 -0.0531 0.1347 -0.0114
#> rs12727865 0.0974 0.0974 0.6045 -0.1834 -0.3308 -0.0591
#> rs147889978 0.3226 0.3226 -0.0984 -0.0490 0.1164 -0.0098
#> rs6702754 0.0974 0.0974 0.6045 -0.1834 -0.3308 -0.0591
#> rs1209264 -0.6036 -0.6036 0.1282 0.1842 -0.2379 0.0765
#> rs12738097 rs12719998 rs72633647 1:154335862:T:TA rs6657938
#> rs6691345 0.5599 0.5641 0.8709 -0.1515 0.5641
#> rs115165870 -0.1212 -0.1336 -0.0531 0.2320 -0.1336
#> rs12727865 0.3289 0.3335 -0.1834 0.1176 0.3335
#> rs147889978 -0.1155 -0.1152 -0.0490 0.3419 -0.1152
#> rs6702754 0.3289 0.3335 -0.1834 0.1176 0.3335
#> rs1209264 0.2434 0.2429 0.1842 -0.4878 0.2429
#> rs112559935 rs67156297 rs6698130 rs6698143 rs6664039 rs12749618
#> rs6691345 -0.0828 -0.1878 0.5641 0.5641 0.8709 -0.1379
#> rs115165870 -0.0411 0.3114 -0.1336 -0.1336 -0.0531 -0.1179
#> rs12727865 -0.1333 0.0974 0.3335 0.3335 -0.1834 0.6045
#> rs147889978 -0.0086 0.3226 -0.1152 -0.1152 -0.0490 -0.0984
#> rs6702754 -0.1333 0.0974 0.3335 0.3335 -0.1834 0.6045
#> rs1209264 0.0662 -0.6036 0.2429 0.2429 0.1842 0.1282
#> rs139347135 rs12068128 rs6662976 rs113624284 1:154339737:CA:C
#> rs6691345 -0.0893 -0.1379 -0.1379 0.8709 -0.1651
#> rs115165870 -0.0525 -0.1179 -0.1179 -0.0531 0.2933
#> rs12727865 0.2373 0.6045 0.6045 -0.1834 0.0766
#> rs147889978 -0.0516 -0.0984 -0.0984 -0.0490 0.3179
#> rs6702754 0.2373 0.6045 0.6045 -0.1834 0.0766
#> rs1209264 0.0383 0.1282 0.1282 0.1842 -0.5869
#> rs116568035 rs68031662 rs35982711 1:154339943:CT:C rs12063437
#> rs6691345 -0.0950 -0.1379 0.5641 0.5181 -0.1379
#> rs115165870 -0.0837 -0.1179 -0.1336 -0.1585 -0.1179
#> rs12727865 0.3495 0.6045 0.3335 0.3245 0.6045
#> rs147889978 -0.0823 -0.0984 -0.1152 -0.1264 -0.0984
#> rs6702754 0.3495 0.6045 0.3335 0.3245 0.6045
#> rs1209264 0.0479 0.1282 0.2429 0.2317 0.1282
#> rs56807273 rs7552370 rs139364224 rs7515004 rs12025518 rs12058332
#> rs6691345 0.8709 -0.1379 -0.0658 0.5615 -0.1871 -0.1379
#> rs115165870 -0.0531 -0.1179 -0.0130 -0.1334 0.3138 -0.1179
#> rs12727865 -0.1834 0.6045 -0.0497 0.3332 0.0961 0.6045
#> rs147889978 -0.0490 -0.0984 -0.0510 -0.1150 0.3251 -0.0984
#> rs6702754 -0.1834 0.6045 -0.0497 0.3332 0.0961 0.6045
#> rs1209264 0.1842 0.1282 -0.4059 0.2425 -0.6008 0.1282
#> rs6659828 rs7518394 1:154342359:AT:A rs79438587 rs6661909 rs6661998
#> rs6691345 0.5641 -0.1379 -0.0112 -0.1771 0.5494 -0.1379
#> rs115165870 -0.1336 -0.1179 0.3769 -0.0842 -0.1325 -0.1179
#> rs12727865 0.3335 0.6045 0.1829 -0.3207 0.3362 0.6045
#> rs147889978 -0.1152 -0.0984 0.4040 -0.0965 -0.1141 -0.0984
#> rs6702754 0.3335 0.6045 0.1829 -0.3207 0.3362 0.6045
#> rs1209264 0.2429 0.1282 0.1324 0.1290 0.2337 0.1282
#> rs6666888 rs6662003 1:154343714:CAA:C rs6701309 rs6667225
#> rs6691345 -0.1379 -0.1398 0.2117 -0.1446 -0.1446
#> rs115165870 -0.1179 -0.1187 -0.1868 -0.1170 -0.1170
#> rs12727865 0.6045 0.6058 -0.5133 0.6033 0.6033
#> rs147889978 -0.0984 -0.0829 -0.2114 -0.0976 -0.0976
#> rs6702754 0.6045 0.6058 -0.5133 0.6033 0.6033
#> rs1209264 0.1282 0.1208 0.4292 0.1265 0.1265
#> rs12061599 rs12066892 1:154344643:CA:C 1:154344801:CAA:C rs7511806
#> rs6691345 0.5588 -0.1465 0.5597 -0.2008 -0.1465
#> rs115165870 -0.1327 -0.1179 -0.1362 -0.1104 -0.1179
#> rs12727865 0.3316 0.5984 0.3246 0.4632 0.5984
#> rs147889978 -0.1144 -0.0984 -0.1178 -0.1348 -0.0984
#> rs6702754 0.3316 0.5984 0.3246 0.4632 0.5984
#> rs1209264 0.2342 0.1191 0.2335 -0.2618 0.1191
#> rs7525436 rs7523399 rs35221765 rs7530735 rs34055426 rs7530868
#> rs6691345 0.5573 -0.1465 -0.1976 -0.1465 -0.1976 -0.1465
#> rs115165870 -0.1336 -0.1179 0.3155 -0.1179 0.3155 -0.1179
#> rs12727865 0.3286 0.5984 0.1024 0.5984 0.1024 0.5984
#> rs147889978 -0.1152 -0.0984 0.3267 -0.0984 0.3267 -0.0984
#> rs6702754 0.3286 0.5984 0.1024 0.5984 0.1024 0.5984
#> rs1209264 0.2286 0.1191 -0.5893 0.1191 -0.5893 0.1191
#> 1:154345580:TAA:T 1:154345656:CAGTATA:C rs72696290 rs71628610
#> rs6691345 -0.1465 -0.1976 -0.3283 -0.1050
#> rs115165870 -0.1179 0.3155 -0.1560 0.4225
#> rs12727865 0.5984 0.1024 -0.3886 0.2887
#> rs147889978 -0.0984 0.3267 -0.1825 0.4670
#> rs6702754 0.5984 0.1024 -0.3886 0.2887
#> rs1209264 0.1191 -0.5893 0.3167 0.0839
#> rs9727988 rs138765671 rs9728585 rs12029292 rs9728024
#> rs6691345 -0.1499 0.8639 0.5573 -0.3283 -0.1465
#> rs115165870 -0.1069 -0.0526 -0.1336 -0.1560 -0.1179
#> rs12727865 0.5785 -0.1819 0.3286 -0.3886 0.5984
#> rs147889978 -0.1036 -0.0487 -0.1152 -0.1825 -0.0984
#> rs6702754 0.5785 -0.1819 0.3286 -0.3886 0.5984
#> rs1209264 0.1302 0.1735 0.2286 0.3167 0.1191
#> 1:154346390:CTT:C rs4406622 rs6662855 rs6663105 rs6672627 rs9803896
#> rs6691345 -0.1252 -0.1465 -0.1465 -0.1465 -0.1465 0.8339
#> rs115165870 -0.0017 -0.1179 -0.1179 -0.1179 -0.1179 -0.0588
#> rs12727865 -0.1347 0.5984 0.5984 0.5984 0.5984 -0.2061
#> rs147889978 -0.0474 -0.0984 -0.0984 -0.0984 -0.0984 -0.0548
#> rs6702754 -0.1347 0.5984 0.5984 0.5984 0.5984 -0.2061
#> rs1209264 -0.7230 0.1191 0.1191 0.1191 0.1191 0.1292
#> rs4526605 rs4622059 rs58548028 1:154347811:TA:T rs61803412
#> rs6691345 -0.1465 -0.1427 -0.1708 0.0866 -0.1446
#> rs115165870 -0.1179 -0.1162 -0.0254 0.0507 -0.1170
#> rs12727865 0.5984 0.5897 -0.1710 0.0825 0.5971
#> rs147889978 -0.0984 -0.0967 -0.0615 -0.0029 -0.0976
#> rs6702754 0.5984 0.5897 -0.1710 0.0825 0.5971
#> rs1209264 0.1191 0.1156 -0.9243 0.0619 0.1173
#> rs28530583 rs28410194 rs9803950 1:154348523:C:CT rs9804073
#> rs6691345 -0.1446 -0.1446 0.8435 0.0157 0.8401
#> rs115165870 -0.1170 -0.1170 -0.0583 0.1196 -0.0593
#> rs12727865 0.5971 0.5971 -0.1980 0.2147 -0.1956
#> rs147889978 -0.0976 -0.0976 -0.0543 0.0468 -0.0552
#> rs6702754 0.5971 0.5971 -0.1980 0.2147 -0.1956
#> rs1209264 0.1173 0.1173 0.1285 0.3678 0.1302
#> rs56264602 rs59356432 rs142922997 rs10908834 rs12565279 rs11582433
#> rs6691345 0.8435 0.8435 -0.0911 -0.5528 -0.1050 0.8435
#> rs115165870 -0.0583 -0.0583 -0.0441 0.1377 0.4225 -0.0583
#> rs12727865 -0.1980 -0.1980 -0.0548 -0.3083 0.2887 -0.1980
#> rs147889978 -0.0543 -0.0543 -0.0434 0.1194 0.4670 -0.0543
#> rs6702754 -0.1980 -0.1980 -0.0548 -0.3083 0.2887 -0.1980
#> rs1209264 0.1285 0.1285 -0.3357 -0.1870 0.0839 0.1285
#> rs6690468 1:154350084:AT:A 1:154350140:CTCTT:C 1:154350146:C:CT
#> rs6691345 -0.1446 -0.0084 -0.1446 0.8420
#> rs115165870 -0.1170 -0.3124 -0.1170 -0.0453
#> rs12727865 0.5971 -0.2234 0.5971 -0.2027
#> rs147889978 -0.0976 -0.3548 -0.0976 -0.0410
#> rs6702754 0.5971 -0.2234 0.5971 -0.2027
#> rs1209264 0.1173 -0.0967 0.1173 0.1336
#> rs61803414 rs3811451 rs16865579 rs34437053 rs57100877 rs60767732
#> rs6691345 -0.1446 -0.1446 -0.1446 0.5568 0.8435 0.8435
#> rs115165870 -0.1170 -0.1170 -0.1170 -0.1375 -0.0583 -0.0583
#> rs12727865 0.5971 0.5971 0.5971 0.3079 -0.1980 -0.1980
#> rs147889978 -0.0976 -0.0976 -0.0976 -0.1191 -0.0543 -0.0543
#> rs6702754 0.5971 0.5971 0.5971 0.3079 -0.1980 -0.1980
#> rs1209264 0.1173 0.1173 0.1173 0.1934 0.1285 0.1285
#> rs60682501 rs60412881 rs1889313 1:154351762:T:TA rs34390599
#> rs6691345 0.8435 0.8435 0.8401 -0.1446 -0.1446
#> rs115165870 -0.0583 -0.0583 -0.0593 -0.1170 -0.1170
#> rs12727865 -0.1980 -0.1980 -0.2016 0.5971 0.5971
#> rs147889978 -0.0543 -0.0543 -0.0552 -0.0976 -0.0976
#> rs6702754 -0.1980 -0.1980 -0.2016 0.5971 0.5971
#> rs1209264 0.1285 0.1285 0.1302 0.1173 0.1173
#> rs1889314 rs61803415 rs1889315 rs61803416 rs138227751 rs1889316
#> rs6691345 -0.5528 -0.1050 0.5568 -0.1050 -0.0572 -0.1446
#> rs115165870 0.1377 0.4225 -0.1375 0.4225 0.5873 -0.1170
#> rs12727865 -0.3083 0.2887 0.3079 0.2887 0.0700 0.5971
#> rs147889978 0.1194 0.4670 -0.1191 0.4670 0.6428 -0.0976
#> rs6702754 -0.3083 0.2887 0.3079 0.2887 0.0700 0.5971
#> rs1209264 -0.1870 0.0839 0.1934 0.0839 0.0669 0.1173
#> rs4304577 rs35112510 rs36029470 rs35629421 rs35091500 rs11265604
#> rs6691345 -0.1446 -0.1446 -0.1379 -0.1446 -0.1446 -0.3275
#> rs115165870 -0.1170 -0.1170 -0.1179 -0.1170 -0.1170 -0.1556
#> rs12727865 0.5971 0.5971 0.5922 0.5971 0.5971 -0.3867
#> rs147889978 -0.0976 -0.0976 -0.0984 -0.0976 -0.0976 -0.1822
#> rs6702754 0.5971 0.5971 0.5922 0.5971 0.5971 -0.3867
#> rs1209264 0.1173 0.1173 0.1191 0.1173 0.1173 0.3161
#> rs34749203 rs11580178 rs11579718 1:154353523:TTC:T rs35595831
#> rs6691345 -0.1427 0.5568 0.8435 -0.1203 -0.1446
#> rs115165870 -0.1162 -0.1375 -0.0583 -0.1086 -0.1170
#> rs12727865 0.5897 0.3079 -0.1980 0.0322 0.5971
#> rs147889978 -0.0967 -0.1191 -0.0543 -0.1196 -0.0976
#> rs6702754 0.5897 0.3079 -0.1980 0.0322 0.5971
#> rs1209264 0.1156 0.1934 0.1285 -0.0285 0.1173
#> rs34146123 1:154353932:C:CT rs34065906 rs112527081 rs116088025
#> rs6691345 -0.1446 -0.1360 -0.1446 -0.1446 0.8468
#> rs115165870 -0.1170 -0.1213 -0.1170 -0.1170 -0.0574
#> rs12727865 0.5971 0.5883 0.5971 0.5971 -0.2006
#> rs147889978 -0.0976 -0.1018 -0.0976 -0.0976 -0.0534
#> rs6702754 0.5971 0.5883 0.5971 0.5971 -0.2006
#> rs1209264 0.1173 0.1253 0.1173 0.1173 0.1268
#> rs61804488 1:154354540:G:GA rs61804489 rs56211693 rs12121085
#> rs6691345 -0.1446 0.5558 -0.1446 0.5568 -0.3283
#> rs115165870 -0.1170 -0.1403 -0.1170 -0.1375 -0.1560
#> rs12727865 0.5971 0.2845 0.5971 0.3031 -0.3842
#> rs147889978 -0.0976 -0.1213 -0.0976 -0.1191 -0.1825
#> rs6702754 0.5971 0.2845 0.5971 0.3031 -0.3842
#> rs1209264 0.1173 0.1962 0.1173 0.1934 0.3167
#> rs78594767 rs72696301 1:154355857:GA:G rs186303011 rs12127600
#> rs6691345 -0.0207 -0.1793 0.4491 -0.1252 -0.3936
#> rs115165870 -0.0114 -0.0242 -0.0510 -0.0017 0.1436
#> rs12727865 -0.0591 -0.1668 0.2523 -0.1347 -0.1954
#> rs147889978 -0.0098 -0.0605 -0.0806 -0.0474 0.1485
#> rs6702754 -0.0591 -0.1668 0.2523 -0.1347 -0.1954
#> rs1209264 0.0765 -0.9299 0.0242 -0.7230 0.4045
#> rs11265606 rs10908835 rs61812563 rs11265607 rs60426166 rs4845612
#> rs6691345 0.5326 0.3976 -0.1031 0.5355 0.5355 -0.3034
#> rs115165870 -0.1107 -0.1424 0.4242 -0.1345 -0.1345 -0.1587
#> rs12727865 0.3101 0.1970 0.2932 0.3160 0.3160 -0.3905
#> rs147889978 -0.1178 -0.1473 0.4688 -0.1161 -0.1161 -0.1851
#> rs6702754 0.3101 0.1970 0.2932 0.3160 0.3160 -0.3905
#> rs1209264 0.1904 -0.3945 0.0914 0.1872 0.1872 0.3219
#> rs6427627 rs9651053 rs12077265 rs114800510 rs9651036 rs9651054
#> rs6691345 0.3976 -0.1793 -0.1476 -0.0587 -0.1793 0.3976
#> rs115165870 -0.1424 -0.0242 -0.1188 0.0054 -0.0242 -0.1424
#> rs12727865 0.1970 -0.1668 0.5783 0.1405 -0.1668 0.1970
#> rs147889978 -0.1473 -0.0605 -0.0992 -0.0279 -0.0605 -0.1473
#> rs6702754 0.1970 -0.1668 0.5783 0.1405 -0.1668 0.1970
#> rs1209264 -0.3945 -0.9299 0.1016 0.0624 -0.9299 -0.3945
#> rs9651055 rs72698103 1:154360829:C:CTT rs72633650 rs115437600
#> rs6691345 -0.1793 -0.3034 -0.1793 0.8173 -0.0964
#> rs115165870 -0.0242 -0.1587 -0.0242 -0.0560 -0.0181
#> rs12727865 -0.1668 -0.3905 -0.1668 -0.1765 -0.1601
#> rs147889978 -0.0605 -0.1851 -0.0605 -0.0520 0.0089
#> rs6702754 -0.1668 -0.3905 -0.1668 -0.1765 -0.1601
#> rs1209264 -0.9299 0.3219 -0.9299 0.1243 0.1021
#> rs111920902 rs12735458 rs12026876 rs77609234 rs147608290
#> rs6691345 -0.1793 -0.0603 -0.1793 -0.1381 0.5355
#> rs115165870 -0.0242 -0.0425 -0.0242 -0.0626 -0.1345
#> rs12727865 -0.1668 0.1316 -0.1668 0.4175 0.3160
#> rs147889978 -0.0605 -0.0417 -0.0605 -0.0825 -0.1161
#> rs6702754 -0.1668 0.1316 -0.1668 0.4175 0.3160
#> rs1209264 -0.9299 -0.0647 -0.9299 0.0643 0.1872
#> 1:154362451:TAC:T rs12563459 rs151220053 rs61812565 rs68138282
#> rs6691345 0.3254 -0.1031 -0.1793 -0.1419 -0.1419
#> rs115165870 -0.0609 0.4242 -0.0242 -0.1163 -0.1163
#> rs12727865 -0.0917 0.2932 -0.1668 0.5869 0.5869
#> rs147889978 -0.0598 0.4688 -0.0605 -0.0967 -0.0967
#> rs6702754 -0.0917 0.2932 -0.1668 0.5869 0.5869
#> rs1209264 0.0525 0.0914 -0.9299 0.1147 0.1147
#> rs11582424 rs11265608 rs11580535 rs11265609 rs9662562 rs12029939
#> rs6691345 0.5355 -0.1793 0.8173 0.5355 0.5355 -0.3034
#> rs115165870 -0.1345 -0.0242 -0.0560 -0.1345 -0.1345 -0.1587
#> rs12727865 0.3160 -0.1668 -0.1765 0.3160 0.3160 -0.3905
#> rs147889978 -0.1161 -0.0605 -0.0520 -0.1161 -0.1161 -0.1851
#> rs6702754 0.3160 -0.1668 -0.1765 0.3160 0.3160 -0.3905
#> rs1209264 0.1872 -0.9299 0.1243 0.1872 0.1872 0.3219
#> rs9724691 rs528284628 rs12033701 1:154365994:C:CT rs6692515
#> rs6691345 0.5355 0.0900 -0.1793 -0.1644 -0.3010
#> rs115165870 -0.1345 -0.0571 -0.0242 -0.0276 -0.1546
#> rs12727865 0.3160 0.1095 -0.1668 -0.1571 -0.3920
#> rs147889978 -0.1161 -0.0165 -0.0605 -0.0635 -0.1811
#> rs6702754 0.3160 0.1095 -0.1668 -0.1571 -0.3920
#> rs1209264 0.1872 0.0636 -0.9299 -0.9134 0.3142
#> 1:154366366:G:GT rs34094138 1:154366992:A:AT rs7551007
#> rs6691345 -0.1812 -0.1031 0.8049 -0.1031
#> rs115165870 -0.0254 0.4242 -0.0592 0.4242
#> rs12727865 -0.1710 0.2932 -0.1765 0.2932
#> rs147889978 -0.0615 0.4688 -0.0552 0.4688
#> rs6702754 -0.1710 0.2932 -0.1765 0.2932
#> rs1209264 -0.9243 0.0914 0.1214 0.0914
#> 1:154367574:TTG:T rs113057497 rs11585004 rs138582043 rs111908494
#> rs6691345 0.4633 -0.1793 0.3976 -0.1793 -0.1793
#> rs115165870 0.1943 -0.0242 -0.1424 -0.0242 -0.0242
#> rs12727865 0.3386 -0.1668 0.1970 -0.1668 -0.1668
#> rs147889978 0.2642 -0.0605 -0.1473 -0.0605 -0.0605
#> rs6702754 0.3386 -0.1668 0.1970 -0.1668 -0.1668
#> rs1209264 0.2030 -0.9299 -0.3945 -0.9299 -0.9299
#> rs113639721 rs61812567 rs147763778 rs144111494 1:154368251:AT:A
#> rs6691345 -0.1793 -0.1031 0.4745 -0.1793 -0.3034
#> rs115165870 -0.0242 0.4242 -0.0349 -0.0242 -0.1587
#> rs12727865 -0.1668 0.2932 -0.0555 -0.1668 -0.3905
#> rs147889978 -0.0605 0.4688 -0.0327 -0.0605 -0.1851
#> rs6702754 -0.1668 0.2932 -0.0555 -0.1668 -0.3905
#> rs1209264 -0.9299 0.0914 0.1045 -0.9299 0.3219
#> rs952146 rs17654071 rs111810442 rs73026617 rs6427631 rs2054855
#> rs6691345 0.3976 -0.3034 -0.1793 -0.1793 0.5341 -0.0766
#> rs115165870 -0.1424 -0.1587 -0.0242 -0.0242 -0.1226 0.4064
#> rs12727865 0.1970 -0.3905 -0.1668 -0.1668 0.3179 0.2256
#> rs147889978 -0.1473 -0.1851 -0.0605 -0.0605 -0.1040 0.2762
#> rs6702754 0.1970 -0.3905 -0.1668 -0.1668 0.3179 0.2256
#> rs1209264 -0.3945 0.3219 -0.9299 -0.9299 0.1888 0.0658
#> rs76033854 1:154371359:T:TAC rs12075836 rs113650000 rs7547455
#> rs6691345 -0.0712 -0.1791 -0.0646 -0.1196 -0.2344
#> rs115165870 -0.0547 -0.2826 0.4219 0.2891 -0.1102
#> rs12727865 0.3077 -0.0507 0.2414 0.5137 0.3900
#> rs147889978 -0.0530 -0.2945 0.4679 0.3414 -0.1311
#> rs6702754 0.3077 -0.0507 0.2414 0.5137 0.3900
#> rs1209264 0.0656 -0.0642 0.1216 0.1352 -0.5233
#> rs115717606 rs7553271 1:154373554:CTATTTATTTATT:C rs79207650
#> rs6691345 -0.0611 -0.3477 0.1307 0.0205
#> rs115165870 -0.0089 0.1321 0.1196 -0.0606
#> rs12727865 0.1614 -0.2214 -0.5853 -0.1588
#> rs147889978 -0.0508 0.1484 0.1161 -0.0313
#> rs6702754 0.1614 -0.2214 -0.5853 -0.1588
#> rs1209264 0.0733 0.4102 -0.0631 0.0890
#> rs116179745 rs115200978 rs3887104 1:154376752:CT:C rs66654715
#> rs6691345 -0.0877 0.3478 -0.0254 -0.0135 -0.0593
#> rs115165870 -0.0425 -0.0472 0.3700 0.0519 -0.0886
#> rs12727865 0.1512 -0.0385 0.1750 -0.0464 0.3403
#> rs147889978 -0.0417 0.0007 0.4461 0.0502 -0.0609
#> rs6702754 0.1512 -0.0385 0.1750 -0.0464 0.3403
#> rs1209264 0.0222 0.0367 0.1510 -0.1190 0.0798
#> rs12132326 rs4845617 rs72698115 rs57569414 rs6427641 rs12083537
#> rs6691345 -0.0990 0.3513 -0.1812 0.7848 -0.3659 -0.0825
#> rs115165870 -0.0411 -0.1325 -0.0254 -0.0411 0.1514 -0.1336
#> rs12727865 -0.1102 0.2179 -0.1636 -0.1946 -0.1740 0.4881
#> rs147889978 -0.0394 -0.1487 -0.0615 -0.0372 0.1323 -0.1010
#> rs6702754 -0.1102 0.2179 -0.1636 -0.1946 -0.1740 0.4881
#> rs1209264 0.0662 -0.4076 -0.9133 0.0874 0.3645 0.1312
#> rs1386821 rs12135008 rs4521987 rs4075015 1:154390212:ATT:A
#> rs6691345 -0.0880 -0.0550 0.0570 -0.3215 0.0188
#> rs115165870 -0.1303 -0.0362 -0.4123 -0.1288 -0.3652
#> rs12727865 0.5065 -0.1754 -0.2053 -0.3211 -0.1064
#> rs147889978 -0.0972 -0.0345 -0.4405 -0.1560 -0.4250
#> rs6702754 0.5065 -0.1754 -0.2053 -0.3211 -0.1064
#> rs1209264 0.1230 0.0375 -0.1209 0.2814 -0.1517
#> rs11588248 rs79794939 rs145909430 rs35717427 1:154392674:T:TA
#> rs6691345 -0.0295 -0.0121 -0.0603 0.7508 -0.1584
#> rs115165870 0.3669 0.5544 0.0089 -0.0430 -0.0242
#> rs12727865 0.1544 0.0395 0.0729 -0.1829 -0.1444
#> rs147889978 0.4265 0.6123 -0.0417 -0.0223 -0.0803
#> rs6702754 0.1544 0.0395 0.0729 -0.1829 -0.1444
#> rs1209264 0.1454 0.0838 0.0222 0.0817 -0.8857
#> rs146389272 1:154392987:T:TTTTA 1:154392987:T:TTTTATTTATTTATTTA
#> rs6691345 0.2049 -0.0467 -0.1005
#> rs115165870 0.0240 -0.0616 0.0146
#> rs12727865 -0.1097 -0.1313 -0.0821
#> rs147889978 -0.0050 -0.0097 -0.0609
#> rs6702754 -0.1097 -0.1313 -0.0821
#> rs1209264 -0.0097 0.0375 -0.6326
#> rs4556347 rs4556348 rs7525477 rs4601580 rs145262901 rs12047973
#> rs6691345 -0.2581 -0.0975 -0.2344 0.2033 0.2703 -0.1286
#> rs115165870 -0.1704 -0.0423 0.0270 -0.0330 -0.0502 -0.0388
#> rs12727865 0.0849 -0.0961 0.0756 -0.0942 -0.0744 -0.1304
#> rs147889978 -0.1936 -0.1243 0.1232 -0.1173 0.0396 -0.0965
#> rs6702754 0.0849 -0.0961 0.0756 -0.0942 -0.0744 -0.1304
#> rs1209264 -0.1381 -0.2720 0.2725 -0.2549 -0.0042 -0.2743
#> rs12048950 rs12048091 rs11265611 rs4133213 rs73026642 rs6684439
#> rs6691345 -0.1223 -0.1281 0.2154 0.3089 -0.0330 0.3094
#> rs115165870 -0.0398 0.0537 -0.0908 -0.0599 0.3169 -0.0629
#> rs12727865 -0.1340 -0.1199 -0.1333 -0.0413 0.0338 -0.0764
#> rs147889978 -0.0974 -0.0913 -0.1266 -0.0515 0.0104 -0.0430
#> rs6702754 -0.1340 -0.1199 -0.1333 -0.0413 0.0338 -0.0764
#> rs1209264 -0.2809 -0.2825 -0.0166 0.1845 -0.0357 0.1869
#> rs6689306 rs77302258 rs12118721 rs12118770 rs12117832 rs10908836
#> rs6691345 0.1988 -0.0973 0.2075 0.1988 0.2075 0.1998
#> rs115165870 -0.0199 -0.0213 -0.0916 -0.0199 -0.0916 -0.0191
#> rs12727865 -0.1653 0.0032 -0.1744 -0.1653 -0.1744 -0.1665
#> rs147889978 -0.1143 -0.0857 -0.1157 -0.1143 -0.1157 -0.1133
#> rs6702754 -0.1653 0.0032 -0.1744 -0.1653 -0.1744 -0.1665
#> rs1209264 -0.0375 -0.4926 -0.0241 -0.0375 -0.0241 -0.0322
#> rs10908837 rs10908838 1:154398637:G:GACAC rs111266048 rs78186112
#> rs6691345 0.2075 0.1998 0.0320 -0.0330 -0.0330
#> rs115165870 -0.0916 -0.0191 -0.0322 0.3169 0.3169
#> rs12727865 -0.1744 -0.1665 -0.0472 0.0338 0.0338
#> rs147889978 -0.1157 -0.1133 0.0005 0.0104 0.0104
#> rs6702754 -0.1744 -0.1665 -0.0472 0.0338 0.0338
#> rs1209264 -0.0241 -0.0322 -0.0908 -0.0357 -0.0357
#> 1:154399395:A:AT rs12023358 rs4845618 rs6687726 rs73014267
#> rs6691345 0.2505 -0.1267 0.2075 0.2075 -0.0330
#> rs115165870 -0.0589 -0.0379 -0.0916 -0.0916 0.3169
#> rs12727865 -0.0672 -0.1326 -0.1744 -0.1744 0.0338
#> rs147889978 0.0014 -0.0956 -0.1157 -0.1157 0.0104
#> rs6702754 -0.0672 -0.1326 -0.1744 -0.1744 0.0338
#> rs1209264 0.1681 -0.2765 -0.0241 -0.0241 -0.0357
#> rs6427658 rs73014271 rs58281895 rs2228144 rs2229237 rs6694817
#> rs6691345 0.1998 -0.0330 -0.0330 -0.1267 -0.0330 0.1998
#> rs115165870 -0.0191 0.3169 0.3169 -0.0379 0.3169 -0.0191
#> rs12727865 -0.1665 0.0338 0.0338 -0.1326 0.0338 -0.1665
#> rs147889978 -0.1133 0.0104 0.0104 -0.0956 0.0104 -0.1133
#> rs6702754 -0.1665 0.0338 0.0338 -0.1326 0.0338 -0.1665
#> rs1209264 -0.0322 -0.0357 -0.0357 -0.2765 -0.0357 -0.0322
#> rs73014279 rs7549250 rs7549338 rs7553796 rs116037345 rs80065028
#> rs6691345 -0.0330 0.2018 0.1942 0.1942 -0.0793 -0.0330
#> rs115165870 0.3169 -0.0933 -0.0212 -0.0212 0.0336 0.3169
#> rs12727865 0.0338 -0.1776 -0.1698 -0.1698 0.2392 0.0338
#> rs147889978 0.0104 -0.1055 -0.1031 -0.1031 -0.0445 0.0104
#> rs6702754 0.0338 -0.1776 -0.1698 -0.1698 0.2392 0.0338
#> rs1209264 -0.0357 -0.0198 -0.0279 -0.0279 0.0621 -0.0357
#> rs56383622 rs4845619 rs115617158 rs59632925 rs4845620 rs7518199
#> rs6691345 0.3005 0.2018 -0.0432 0.1942 0.3005 0.3005
#> rs115165870 -0.0535 -0.0933 -0.0221 -0.0212 -0.0535 -0.0535
#> rs12727865 -0.0871 -0.1776 0.1584 -0.1698 -0.0871 -0.0871
#> rs147889978 -0.0336 -0.1055 0.6261 -0.1031 -0.0336 -0.0336
#> rs6702754 -0.0871 -0.1776 0.1584 -0.1698 -0.0871 -0.0871
#> rs1209264 0.1843 -0.0198 0.0490 -0.0279 0.1843 0.1843
#> rs7521458 rs4845371 rs57502626 rs6667434 rs79778789 rs55826755
#> rs6691345 0.2993 0.1942 -0.1267 0.1942 0.2521 -0.1248
#> rs115165870 -0.0543 -0.0212 -0.0534 -0.0212 -0.0441 -0.0524
#> rs12727865 -0.0856 -0.1698 -0.1208 -0.1698 0.0018 -0.1290
#> rs147889978 -0.0343 -0.1031 -0.0956 -0.1031 0.0572 -0.0948
#> rs6702754 -0.0856 -0.1698 -0.1208 -0.1698 0.0018 -0.1290
#> rs1209264 0.1859 -0.0279 -0.2678 -0.0279 0.0832 -0.2699
#> rs4845621 1:154409893:A:AT 1:154410356:AT:A rs61812592 rs61812593
#> rs6691345 0.3005 0.2583 0.2883 -0.1267 -0.1267
#> rs115165870 -0.0535 -0.0409 -0.0701 -0.0534 -0.0534
#> rs12727865 -0.0871 -0.1168 -0.0786 -0.1208 -0.1208
#> rs147889978 -0.0336 -0.0325 -0.0371 -0.0956 -0.0956
#> rs6702754 -0.0871 -0.1168 -0.0786 -0.1208 -0.1208
#> rs1209264 0.1843 0.1673 0.1697 -0.2678 -0.2678
#> 1:154410686:C:CT rs4553185 rs4845622 rs115224285 rs61812594
#> rs6691345 -0.1315 0.2018 0.3005 -0.0570 -0.1185
#> rs115165870 -0.0401 -0.0933 -0.0535 -0.0502 -0.0534
#> rs12727865 -0.1172 -0.1776 -0.0871 -0.0577 -0.1326
#> rs147889978 -0.0981 -0.1055 -0.0336 0.0396 -0.0956
#> rs6702754 -0.1172 -0.1776 -0.0871 -0.0577 -0.1326
#> rs1209264 -0.2567 -0.0198 0.1843 0.0452 -0.2765
#> rs76093405 rs61812595 rs59502179 rs149219382 rs113325045
#> rs6691345 -0.0432 -0.0576 -0.0330 -0.0429 -0.0811
#> rs115165870 -0.0221 -0.0211 0.3169 -0.0114 -0.0319
#> rs12727865 0.1584 -0.1605 0.0338 0.1632 -0.0839
#> rs147889978 0.6261 -0.0371 0.0104 0.7094 0.0030
#> rs6702754 0.1584 -0.1605 0.0338 0.1632 -0.0839
#> rs1209264 0.0490 0.0906 -0.0357 0.0530 0.0479
#> rs114660934 rs4393147 rs4453032 rs6664201 rs61812596
#> rs6691345 -0.1098 0.3005 0.3005 0.3005 -0.1248
#> rs115165870 -0.0381 -0.0535 -0.0535 -0.0535 -0.0524
#> rs12727865 -0.0860 -0.0871 -0.0871 -0.0871 -0.1290
#> rs147889978 -0.0365 -0.0336 -0.0336 -0.0336 -0.0948
#> rs6702754 -0.0860 -0.0871 -0.0871 -0.0871 -0.1290
#> rs1209264 -0.3952 0.1843 0.1843 0.1843 -0.2699
#> 1:154415264:CT:C rs4845372 rs149326073 rs79219014 rs4845623
#> rs6691345 0.2774 0.2908 0.1063 -0.0570 0.2908
#> rs115165870 0.0340 0.0191 0.0610 0.0813 0.0191
#> rs12727865 -0.0884 -0.0699 -0.0683 0.0092 -0.0699
#> rs147889978 -0.0040 -0.0310 -0.0370 -0.0049 -0.0310
#> rs6702754 -0.0884 -0.0699 -0.0683 0.0092 -0.0699
#> rs1209264 0.1775 0.1748 0.0154 0.0205 0.1748
#> rs186110340 rs116141616 rs80033405 1:154416684:CT:C rs139952834
#> rs6691345 0.0194 0.0833 0.2785 -0.0076 -0.0926
#> rs115165870 0.5823 -0.0064 -0.0441 0.0663 -0.0285
#> rs12727865 -0.1514 0.0259 -0.0737 0.0519 -0.1471
#> rs147889978 -0.0022 -0.0049 -0.0434 0.0284 -0.0270
#> rs6702754 -0.1514 0.0259 -0.0737 0.0519 -0.1471
#> rs1209264 0.0665 0.0452 0.0273 0.0899 0.0032
#> rs12753254 rs12730036 rs11265612 rs55800510 rs4845373 rs6683206
#> rs6691345 0.3030 0.3030 0.1971 -0.1248 0.3018 0.1971
#> rs115165870 -0.0519 -0.0519 -0.0197 -0.0524 -0.0527 -0.0197
#> rs12727865 -0.0857 -0.0857 -0.1684 -0.1290 -0.0842 -0.1640
#> rs147889978 -0.0320 -0.0320 -0.1015 -0.0948 -0.0328 -0.1015
#> rs6702754 -0.0857 -0.0857 -0.1684 -0.1290 -0.0842 -0.1640
#> rs1209264 0.1811 0.1811 -0.0307 -0.2699 0.1761 -0.0241
#> rs113617296 rs186043699 rs564884827 1:154418225:C:CAA rs11265613
#> rs6691345 -0.0330 -0.0763 -0.0763 0.2932 0.2813
#> rs115165870 0.3169 -0.0571 -0.0571 0.0199 -0.0607
#> rs12727865 0.0338 0.0055 0.0055 -0.0807 -0.0841
#> rs147889978 0.0104 -0.0165 -0.0165 -0.0303 -0.0528
#> rs6702754 0.0338 0.0055 0.0055 -0.0807 -0.0841
#> rs1209264 -0.0357 0.0416 0.0416 0.1607 0.1632
#> rs4576655 rs4537545 rs11265614 rs58229059 rs139935284 rs111301013
#> rs6691345 0.3031 0.2981 -0.0273 -0.0383 -0.0647 -0.1284
#> rs115165870 0.0238 0.0246 0.3329 0.3025 0.1045 -0.0502
#> rs12727865 -0.0759 -0.0730 0.0074 0.0018 0.0206 -0.1209
#> rs147889978 -0.0268 -0.0261 0.0141 0.0069 0.0069 -0.0924
#> rs6702754 -0.0759 -0.0730 0.0074 0.0018 0.0206 -0.1209
#> rs1209264 0.1748 0.1732 -0.0436 -0.0285 -0.0006 -0.2549
#> rs6686750 rs12730935 1:154420028:TAC:T rs61812598 rs537182023
#> rs6691345 0.2033 0.3145 0.3031 0.3145 -0.0046
#> rs115165870 -0.0138 -0.0488 0.0311 -0.0488 0.0414
#> rs12727865 -0.1726 -0.0905 -0.0784 -0.0905 -0.0999
#> rs147889978 -0.0957 -0.0287 -0.0327 -0.0287 -0.0479
#> rs6702754 -0.1726 -0.0905 -0.0784 -0.0905 -0.0999
#> rs1209264 -0.0221 0.1829 0.1647 0.1829 -0.0098
#> rs113580743 rs7512646 1:154420517:CT:C rs57342848 rs7529229
#> rs6691345 -0.0698 0.3044 -0.0273 -0.0273 0.3044
#> rs115165870 -0.0425 0.0246 0.3329 0.3329 0.0246
#> rs12727865 -0.0705 -0.0820 0.0074 0.0074 -0.0820
#> rs147889978 0.0200 -0.0261 0.0141 0.0141 -0.0261
#> rs6702754 -0.0705 -0.0820 0.0074 0.0074 -0.0820
#> rs1209264 0.0690 0.1732 -0.0436 -0.0436 0.1732
#> rs12404927 rs12403159 rs12404936 rs61812599 rs111808975 rs4845625
#> rs6691345 0.2052 0.3031 0.3056 -0.1293 -0.0273 0.2043
#> rs115165870 -0.0131 0.0238 0.0253 -0.0508 0.3329 -0.0130
#> rs12727865 -0.1700 -0.0849 -0.0835 -0.1178 0.0074 -0.1693
#> rs147889978 -0.0951 -0.0268 -0.0253 -0.0926 0.0141 -0.0948
#> rs6702754 -0.1700 -0.0849 -0.0835 -0.1178 0.0074 -0.1693
#> rs1209264 -0.0236 0.1748 0.1782 -0.2596 -0.0436 -0.0169
#> rs45478197 rs4845626 rs12129500 rs7536152 rs11804305 rs7526131
#> rs6691345 -0.1019 -0.1301 0.2043 0.2043 -0.1265 0.2043
#> rs115165870 -0.0399 0.0454 -0.0130 -0.0130 -0.0493 -0.0130
#> rs12727865 0.0196 -0.1115 -0.1693 -0.1693 -0.1173 -0.1693
#> rs147889978 -0.0828 -0.0846 -0.0948 -0.0948 -0.0915 -0.0948
#> rs6702754 0.0196 -0.1115 -0.1693 -0.1693 -0.1173 -0.1693
#> rs1209264 -0.4577 -0.2526 -0.0169 -0.0169 -0.2483 -0.0169
#> rs12126142 rs6689393 rs12739228 rs4129267 rs4845374 rs2228145
#> rs6691345 0.3095 0.2000 -0.0581 0.3095 -0.1284 0.3095
#> rs115165870 -0.0480 -0.0123 -0.0869 -0.0480 -0.0502 -0.0480
#> rs12727865 -0.0921 -0.1712 0.2952 -0.0921 -0.1092 -0.0921
#> rs147889978 -0.0279 -0.0942 -0.0597 -0.0279 -0.0924 -0.0279
#> rs6702754 -0.0921 -0.1712 0.2952 -0.0921 -0.1092 -0.0921
#> rs1209264 0.1813 -0.0183 0.0640 0.1813 -0.2462 0.1813
#> 1:154427931:CT:C rs12133641 rs140393337 rs6694258 rs11265618
#> rs6691345 -0.0433 0.3056 -0.0252 0.2000 -0.1282
#> rs115165870 0.0022 -0.0494 -0.0377 -0.0123 0.0464
#> rs12727865 -0.0281 -0.0840 -0.0307 -0.1712 -0.1137
#> rs147889978 0.0037 -0.0293 -0.0370 -0.0942 -0.0838
#> rs6702754 -0.0281 -0.0840 -0.0307 -0.1712 -0.1137
#> rs1209264 0.0052 0.1837 0.0710 -0.0183 -0.2546
#> 1:154430445:T:TTTC rs191793127 rs10908839 rs142712385 rs151017214
#> rs6691345 0.1815 -0.0790 0.1849 -0.0762 -0.0762
#> rs115165870 0.1015 -0.0757 0.1032 -0.0202 -0.0202
#> rs12727865 0.0401 0.2754 0.0366 -0.0204 -0.0204
#> rs147889978 0.0441 -0.0450 0.0197 -0.0926 -0.0926
#> rs6702754 0.0401 0.2754 0.0366 -0.0204 -0.0204
#> rs1209264 0.0825 0.0445 0.0866 -0.3928 -0.3928
#> rs10159236 rs10752641 rs4329505 rs4308966 rs6690230 rs35699331
#> rs6691345 -0.1227 0.1918 -0.1246 -0.1246 0.2650 0.1918
#> rs115165870 -0.0474 0.0239 -0.0484 -0.0484 0.0574 0.0239
#> rs12727865 -0.1159 0.0377 -0.1078 -0.1078 0.1138 0.0377
#> rs147889978 -0.0898 0.0170 -0.0906 -0.0906 0.0825 0.0170
#> rs6702754 -0.1159 0.0377 -0.1078 -0.1078 0.1138 0.0377
#> rs1209264 -0.2525 0.1021 -0.2504 -0.2504 0.2776 0.1021
#> 1:154432905:GA:G rs6698040 rs6695045 rs7537291 rs7546068 rs7537316
#> rs6691345 0.1918 0.1918 0.2650 0.1918 0.1918 0.1918
#> rs115165870 0.0239 0.0239 0.0574 0.0239 0.0239 0.0239
#> rs12727865 0.0377 0.0377 0.1138 0.0377 0.0377 0.0377
#> rs147889978 0.0170 0.0170 0.0825 0.0170 0.0170 0.0170
#> rs6702754 0.0377 0.0377 0.1138 0.0377 0.0377 0.0377
#> rs1209264 0.1021 0.1021 0.2776 0.1021 0.1021 0.1021
#> rs147140395 rs7546552 rs7546555 rs35938325 rs114879247
#> rs6691345 -0.0802 0.1918 0.1918 -0.0330 -0.0384
#> rs115165870 -0.0223 0.0239 0.0239 0.3169 0.0338
#> rs12727865 0.1880 0.0377 0.0377 -0.0053 0.1125
#> rs147889978 -0.0209 0.0170 0.0170 0.0104 -0.0074
#> rs6702754 0.1880 0.0377 0.0377 -0.0053 0.1125
#> rs1209264 0.0102 0.1021 0.1021 -0.0647 0.0251
#> 1:154434850:C:CT rs6687597 rs55676222 rs55668699 rs6427672
#> rs6691345 0.2417 0.1918 -0.0473 -0.1870 0.1918
#> rs115165870 0.0457 0.0239 -0.0505 -0.1078 0.0239
#> rs12727865 0.1176 0.0377 -0.1318 -0.0369 0.0377
#> rs147889978 0.0336 0.0170 0.0129 -0.0093 0.0170
#> rs6702754 0.1176 0.0377 -0.1318 -0.0369 0.0377
#> rs1209264 0.2693 0.1021 0.1181 -0.0542 0.1021
#> 1:154435631:GT:G rs4240872 rs4509570 rs4341355 rs61812626
#> rs6691345 0.1858 0.1926 0.1926 0.1926 -0.1227
#> rs115165870 0.1102 0.0246 0.0246 0.0246 -0.0474
#> rs12727865 0.0546 0.0357 0.0357 0.0357 -0.1159
#> rs147889978 0.0269 0.0177 0.0177 0.0177 -0.0898
#> rs6702754 0.0546 0.0357 0.0357 0.0357 -0.1159
#> rs1209264 0.0870 0.1001 0.1001 0.1001 -0.2525
#> rs58638689 rs5777914 rs4345796 rs4291493 rs2229238 rs7514452
#> rs6691345 0.1918 0.0566 -0.1227 0.1944 0.1568 0.1513
#> rs115165870 0.0239 0.0526 -0.0474 0.0254 0.1241 0.1249
#> rs12727865 0.0377 0.0088 -0.1159 0.0340 0.1544 0.1525
#> rs147889978 0.0170 0.0839 -0.0898 0.0185 -0.0053 -0.0044
#> rs6702754 0.0377 0.0088 -0.1159 0.0340 0.1544 0.1525
#> rs1209264 0.1021 0.0375 -0.2525 0.0986 0.1158 0.1141
#> rs114445392 rs4072391 rs41310931 rs4379670 1:154439884:CTT:C
#> rs6691345 0.2407 0.1607 -0.0481 0.1563 -0.0330
#> rs115165870 -0.0425 0.1224 0.2777 0.1206 0.3169
#> rs12727865 -0.0053 0.1479 -0.0208 0.1599 -0.0053
#> rs147889978 0.0625 0.0069 0.0007 0.0184 0.0104
#> rs6702754 -0.0053 0.1479 -0.0208 0.1599 -0.0053
#> rs1209264 0.0800 0.1037 -0.0418 0.1171 -0.0647
#> rs73016210 rs41308415 1:154441856:GT:G rs11265621 rs79925547
#> rs6691345 -0.0330 -0.0330 0.2449 0.2384 0.2630
#> rs115165870 0.3169 0.3169 0.0712 0.0681 -0.0457
#> rs12727865 -0.0053 -0.0053 0.2037 0.2011 -0.0646
#> rs147889978 0.0104 0.0104 0.0625 0.0715 -0.0449
#> rs6702754 -0.0053 -0.0053 0.2037 0.2011 -0.0646
#> rs1209264 -0.0647 -0.0647 0.3135 0.3055 0.0322
#> rs139460294 1:154443507:CA:C rs71517777 rs60987114 rs59844441
#> rs6691345 -0.0302 0.1653 -0.0915 0.1745 0.1745
#> rs115165870 -0.0557 0.0360 -0.0391 0.0045 0.0045
#> rs12727865 0.1670 0.1526 -0.0253 0.1345 0.1345
#> rs147889978 -0.0548 0.0163 -0.0921 -0.0020 -0.0020
#> rs6702754 0.1670 0.1526 -0.0253 0.1345 0.1345
#> rs1209264 0.0377 0.1238 -0.1884 0.1266 0.1266
#> rs7526293 rs6669229 1:154444606:CAA:C rs79480105 rs6675472
#> rs6691345 0.1661 0.1661 0.0757 -0.0985 0.1661
#> rs115165870 0.0366 0.0366 0.0519 -0.0319 0.0366
#> rs12727865 0.1499 0.1499 0.0704 -0.1214 0.1499
#> rs147889978 0.0170 0.0170 -0.0064 -0.0635 0.0170
#> rs6702754 0.1499 0.1499 0.0704 -0.1214 0.1499
#> rs1209264 0.1291 0.1291 0.0067 -0.3770 0.1291
#> rs58348886 rs185104823 rs150056239 1:154450904:CAA:C rs7555748
#> rs6691345 -0.1636 0.0756 -0.1014 -0.0194 0.1644
#> rs115165870 -0.0351 -0.0008 -0.0658 0.0037 -0.0606
#> rs12727865 -0.1493 -0.0208 0.0571 -0.0719 0.0365
#> rs147889978 -0.0154 0.0007 -0.0319 -0.0893 -0.0313
#> rs6702754 -0.1493 -0.0208 0.0571 -0.0719 0.0365
#> rs1209264 -0.1255 -0.0418 0.0147 -0.0665 0.0434
#> rs72698160 rs11265622 rs14021 rs76518735 rs144029367 rs12568083
#> rs6691345 -0.1166 0.2366 -0.1218 -0.1014 -0.0985 0.2366
#> rs115165870 -0.0440 0.0706 -0.0471 -0.0658 -0.0646 0.0706
#> rs12727865 -0.1007 0.1976 -0.0976 0.0571 0.0659 0.1976
#> rs147889978 -0.0717 0.0739 -0.0735 -0.0319 -0.0303 0.0739
#> rs6702754 -0.1007 0.1976 -0.0976 0.0571 0.0659 0.1976
#> rs1209264 -0.2532 0.3109 -0.2594 0.0147 0.0110 0.3109
#> rs4474240 rs10908840 1:154460332:C:CA rs111885536 rs41269913
#> rs6691345 0.1275 -0.0663 -0.1692 -0.1218 0.1729
#> rs115165870 0.0499 0.0893 -0.0181 -0.0471 0.0037
#> rs12727865 0.0909 0.2385 -0.1566 -0.0976 -0.0688
#> rs147889978 0.0762 0.1011 -0.0255 -0.0735 -0.0214
#> rs6702754 0.0909 0.2385 -0.1566 -0.0976 -0.0688
#> rs1209264 0.2617 0.2205 -0.1203 -0.2594 0.0242
#> rs16836054 rs12044132 rs115306743 rs4845634 rs4478801 rs6684921
#> rs6691345 -0.1218 0.4082 -0.0453 -0.1218 0.2366 0.2366
#> rs115165870 -0.0471 -0.0263 -0.0445 -0.0471 0.0706 0.0706
#> rs12727865 -0.0976 -0.0583 0.0137 -0.0976 0.1976 0.1976
#> rs147889978 -0.0735 -0.0379 0.0449 -0.0735 0.0739 0.0739
#> rs6702754 -0.0976 -0.0583 0.0137 -0.0976 0.1976 0.1976
#> rs1209264 -0.2594 0.1186 0.0592 -0.2594 0.3109 0.3109
#> rs73018293 rs6686276 rs59838898 1:154467003:GT:G rs61812631
#> rs6691345 -0.1607 0.2366 -0.1607 -0.0348 -0.1218
#> rs115165870 -0.0375 0.0706 -0.0375 0.0571 -0.0471
#> rs12727865 -0.1479 0.1976 -0.1479 0.0694 -0.0976
#> rs147889978 -0.0179 0.0739 -0.0179 -0.0166 -0.0735
#> rs6702754 -0.1479 0.1976 -0.1479 0.0694 -0.0976
#> rs1209264 -0.1275 0.3109 -0.1275 0.0286 -0.2594
#> rs10047079 1:154468210:TA:T rs140615642 rs6689710 rs6689965
#> rs6691345 -0.1607 0.1235 -0.0603 0.1275 0.2366
#> rs115165870 -0.0375 0.0559 0.0089 0.0499 0.0706
#> rs12727865 -0.1479 0.0865 0.1707 0.0909 0.1976
#> rs147889978 -0.0179 0.0817 -0.0417 0.0762 0.0739
#> rs6702754 -0.1479 0.0865 0.1707 0.0909 0.1976
#> rs1209264 -0.1275 0.2454 0.0222 0.2617 0.3109
#> 1:154470675:TCTC:T rs56233546 1:154472533:G:GT rs6700296 rs4845635
#> rs6691345 0.4082 -0.1218 -0.1607 0.2366 0.1275
#> rs115165870 -0.0263 -0.0471 -0.0375 0.0706 0.0499
#> rs12727865 -0.0583 -0.0976 -0.1479 0.1976 0.0909
#> rs147889978 -0.0379 -0.0735 -0.0179 0.0739 0.0762
#> rs6702754 -0.0583 -0.0976 -0.1479 0.1976 0.0909
#> rs1209264 0.1186 -0.2594 -0.1275 0.3109 0.2617
#> rs6703672 rs12753666 rs12753680 rs6658175 rs6698971
#> rs6691345 0.1275 0.2366 0.2366 0.2376 0.2376
#> rs115165870 0.0499 0.0706 0.0706 0.0709 0.0709
#> rs12727865 0.0909 0.1976 0.1976 0.1984 0.1984
#> rs147889978 0.0762 0.0739 0.0739 0.0742 0.0742
#> rs6702754 0.0909 0.1976 0.1976 0.1984 0.1984
#> rs1209264 0.2617 0.3109 0.3109 0.3122 0.3122
#> 1:154476235:CG:C rs116247632 rs6662503 rs6696177 rs12118018
#> rs6691345 -0.0302 -0.0433 0.1275 0.1275 0.2366
#> rs115165870 0.0239 0.0980 0.0499 0.0499 0.0706
#> rs12727865 0.1063 0.0083 0.0909 0.0909 0.1976
#> rs147889978 -0.0144 0.0037 0.0762 0.0762 0.0739
#> rs6702754 0.1063 0.0083 0.0909 0.0909 0.1976
#> rs1209264 0.0153 -0.0218 0.2617 0.2617 0.3109
#> rs12118074 rs75456865 1:154478263:C:CA rs12124333 rs12119111
#> rs6691345 0.1275 -0.0302 0.2366 0.1275 0.2348
#> rs115165870 0.0499 0.0239 0.0706 0.0499 0.0698
#> rs12727865 0.0909 0.1063 0.1976 0.0909 0.1945
#> rs147889978 0.0762 -0.0144 0.0739 0.0762 0.0731
#> rs6702754 0.0909 0.1063 0.1976 0.0909 0.1945
#> rs1209264 0.2617 0.0153 0.3109 0.2617 0.3119
#> rs139506310 1:154478856:C:CT rs146563764 rs6664608
#> rs6691345 -0.0647 0.1770 -0.0570 0.2366
#> rs115165870 0.0549 0.0097 -0.0502 0.0706
#> rs12727865 -0.1114 0.1466 -0.0744 0.1976
#> rs147889978 -0.0434 0.0411 -0.0049 0.0739
#> rs6702754 -0.1114 0.1466 -0.0744 0.1976
#> rs1209264 -0.0006 0.1155 0.0205 0.3109
#> 1:154479999:T:TCCCTGGTG rs35013837 rs72698167 rs11577167 rs66980031
#> rs6691345 -0.1218 -0.0702 -0.1218 -0.0632 -0.0660
#> rs115165870 -0.0471 -0.0244 -0.0471 0.0474 -0.0593
#> rs12727865 -0.0976 0.2331 -0.0976 0.1805 0.2731
#> rs147889978 -0.0735 -0.0733 -0.0735 -0.0374 -0.0575
#> rs6702754 -0.0976 0.2331 -0.0976 0.1805 0.2731
#> rs1209264 -0.2594 0.0500 -0.2594 0.0791 0.0588
#> rs7513603 1:154481571:C:CTT rs10752642 1:154482262:AT:A rs73020232
#> rs6691345 0.1275 0.1005 0.1275 0.2004 -0.1607
#> rs115165870 0.0499 0.0748 0.0499 -0.0407 -0.0375
#> rs12727865 0.0909 -0.1439 0.0909 -0.0739 -0.1479
#> rs147889978 0.0762 0.0695 0.0762 -0.0401 -0.0179
#> rs6702754 0.0909 -0.1439 0.0909 -0.0739 -0.1479
#> rs1209264 0.2617 0.1796 0.2617 0.0166 -0.1275
#> 1:154482716:TAA:T rs73020234 rs116059394 rs12023772 rs9660786
#> rs6691345 0.1291 -0.1607 -0.1014 0.4109 0.2366
#> rs115165870 0.0436 -0.0375 -0.0300 -0.0254 0.0706
#> rs12727865 0.0858 -0.1479 -0.1553 -0.0606 0.1976
#> rs147889978 0.0385 -0.0179 -0.0824 -0.0370 0.0739
#> rs6702754 0.0858 -0.1479 -0.1553 -0.0606 0.1976
#> rs1209264 0.2733 -0.1275 -0.3118 0.1169 0.3109
#> rs7518694 rs7526247 rs73020246 rs4845636 rs72698169 rs12740969
#> rs6691345 0.2302 0.1275 -0.1607 0.1275 0.4109 0.2357
#> rs115165870 0.0676 0.0499 -0.0375 0.0499 -0.0254 0.0701
#> rs12727865 0.2083 0.0909 -0.1479 0.0909 -0.0606 0.1998
#> rs147889978 0.0947 0.0762 -0.0179 0.0762 -0.0370 0.0734
#> rs6702754 0.2083 0.0909 -0.1479 0.0909 -0.0606 0.1998
#> rs1209264 0.3096 0.2617 -0.1275 0.2617 0.1169 0.3132
#> rs11490956 rs10465961 rs111600849 rs12403537 rs10908841 rs149793513
#> rs6691345 -0.1589 0.0416 -0.1589 -0.1589 0.2357 -0.0273
#> rs115165870 -0.0366 0.0528 -0.0366 -0.0366 0.0701 0.3329
#> rs12727865 -0.1499 0.0545 -0.1499 -0.1499 0.1998 0.0074
#> rs147889978 -0.0170 0.0741 -0.0170 -0.0170 0.0734 0.0141
#> rs6702754 -0.1499 0.0545 -0.1499 -0.1499 0.1998 0.0074
#> rs1209264 -0.1291 0.0921 -0.1291 -0.1291 0.3132 -0.0436
#> rs7519499 rs12128408 rs4845637 rs4845638 rs4845639 rs6674171
#> rs6691345 0.2357 0.2357 0.2357 0.2357 0.2357 -0.1589
#> rs115165870 0.0701 0.0701 0.0701 0.0701 0.0701 -0.0366
#> rs12727865 0.1998 0.1998 0.1998 0.1998 0.1998 -0.1499
#> rs147889978 0.0734 0.0734 0.0734 0.0734 0.0734 -0.0170
#> rs6702754 0.1998 0.1998 0.1998 0.1998 0.1998 -0.1499
#> rs1209264 0.3132 0.3132 0.3132 0.3132 0.3132 -0.1291
#> rs59239860 1:154492240:CTG:C rs4288587 rs4518898 rs77184252
#> rs6691345 -0.1516 0.1275 0.1275 0.1275 -0.1589
#> rs115165870 -0.1216 0.0499 0.0499 0.0499 -0.0366
#> rs12727865 -0.1499 0.0909 0.0909 0.0909 -0.1499
#> rs147889978 -0.0200 0.0762 0.0762 0.0762 -0.0170
#> rs6702754 -0.1499 0.0909 0.0909 0.0909 -0.1499
#> rs1209264 -0.1131 0.2617 0.2617 0.2617 -0.1291
#> rs10908842 1:154493310:C:CT rs10908843 rs6670375 rs4575077
#> rs6691345 0.2357 -0.1572 0.2339 0.1275 0.1275
#> rs115165870 0.0701 -0.0358 0.0692 0.0499 0.0499
#> rs12727865 0.1998 -0.1466 0.1967 0.0909 0.0909
#> rs147889978 0.0734 -0.0162 0.0726 0.0762 0.0762
#> rs6702754 0.1998 -0.1466 0.1967 0.0909 0.0909
#> rs1209264 0.3132 -0.1308 0.3142 0.2617 0.2617
#> 1:154495169:ACT:A rs4345797 rs4584384 rs11265627 rs56100876
#> rs6691345 0.1275 0.2339 0.2339 0.1275 0.0132
#> rs115165870 0.0499 0.0692 0.0692 0.0499 -0.0064
#> rs12727865 0.0909 0.1967 0.1967 0.0909 -0.0744
#> rs147889978 0.0762 0.0726 0.0726 0.0762 -0.0494
#> rs6702754 0.0909 0.1967 0.1967 0.0909 -0.0744
#> rs1209264 0.2617 0.3142 0.3142 0.2617 0.0700
#> rs11265628 rs6691727 rs6687112 rs6427716 rs4845640
#> rs6691345 0.2339 0.1275 0.1275 0.1275 0.1275
#> rs115165870 0.0692 0.0499 0.0499 0.0499 0.0499
#> rs12727865 0.1967 0.0909 0.0909 0.0909 0.0909
#> rs147889978 0.0726 0.0762 0.0762 0.0762 0.0762
#> rs6702754 0.1967 0.0909 0.0909 0.0909 0.0909
#> rs1209264 0.3142 0.2617 0.2617 0.2617 0.2617
#> 1:154497873:AAAG:A rs4845641 rs4845642 rs75631461 rs4845643
#> rs6691345 0.1275 0.1275 0.2339 0.0132 0.1275
#> rs115165870 0.0499 0.0499 0.0692 -0.0064 0.0499
#> rs12727865 0.0909 0.0909 0.1967 -0.0744 0.0909
#> rs147889978 0.0762 0.0762 0.0726 -0.0494 0.0762
#> rs6702754 0.0909 0.0909 0.1967 -0.0744 0.0909
#> rs1209264 0.2617 0.2617 0.3142 0.0700 0.2617
#> rs12128984 rs11265629 1:154498679:CA:C 1:154498893:ATTT:A rs4585969
#> rs6691345 0.1275 0.1275 0.1006 0.1212 0.1275
#> rs115165870 0.0499 0.0499 -0.0322 0.0508 0.0499
#> rs12727865 0.0909 0.0909 -0.0171 0.0945 0.0909
#> rs147889978 0.0762 0.0762 0.0933 0.0771 0.0762
#> rs6702754 0.0909 0.0909 -0.0171 0.0945 0.0909
#> rs1209264 0.2617 0.2617 0.2184 0.2682 0.2617
#> rs4307559 rs112614350 rs78664422 rs183641528 rs4307560
#> rs6691345 0.1275 0.0965 -0.0278 -0.0603 0.1275
#> rs115165870 0.0499 0.0560 0.1936 0.0089 0.0499
#> rs12727865 0.0909 -0.0594 0.0999 0.1707 0.0909
#> rs147889978 0.0762 -0.0388 0.2363 -0.0417 0.0762
#> rs6702754 0.0909 -0.0594 0.0999 0.1707 0.0909
#> rs1209264 0.2617 0.0475 0.0910 0.0222 0.2617
#> 1:154499368:AT:A rs12406822 rs6701586 rs6697103 rs6697115 rs6656395
#> rs6691345 0.1275 -0.1572 0.1275 0.1275 0.1275 0.1275
#> rs115165870 0.0499 -0.0358 0.0499 0.0499 0.0499 0.0499
#> rs12727865 0.0909 -0.1466 0.0909 0.0909 0.0909 0.0909
#> rs147889978 0.0762 -0.0162 0.0762 0.0762 0.0762 0.0762
#> rs6702754 0.0909 -0.1466 0.0909 0.0909 0.0909 0.0909
#> rs1209264 0.2617 -0.1308 0.2617 0.2617 0.2617 0.2617
#> rs4131514 1:154500186:TA:T 1:154500690:TAA:T 1:154500746:TG:T
#> rs6691345 0.1275 -0.0273 0.1335 0.1293
#> rs115165870 0.0499 0.3329 -0.0219 0.0508
#> rs12727865 0.0909 0.0074 0.1209 0.0887
#> rs147889978 0.0762 0.0141 0.0451 0.0771
#> rs6702754 0.0909 0.0074 0.1209 0.0887
#> rs1209264 0.2617 -0.0436 0.2854 0.2596
#> rs10908844 rs10908845 1:154501135:A:AAAT rs12129484
#> rs6691345 0.1275 0.2339 0.1293 0.1275
#> rs115165870 0.0499 0.0692 0.0508 0.0499
#> rs12727865 0.0909 0.1967 0.0887 0.0909
#> rs147889978 0.0762 0.0726 0.0771 0.0762
#> rs6702754 0.0909 0.1967 0.0887 0.0909
#> rs1209264 0.2617 0.3142 0.2596 0.2617
#> 1:154501249:A:AC rs12405637 1:154501291:CA:C rs10908846 rs4845644
#> rs6691345 0.1275 -0.1572 0.1275 0.1275 -0.1218
#> rs115165870 0.0499 -0.0358 0.0499 0.0499 -0.0471
#> rs12727865 0.0909 -0.1466 0.0909 0.0909 -0.0976
#> rs147889978 0.0762 -0.0162 0.0762 0.0762 -0.0735
#> rs6702754 0.0909 -0.1466 0.0909 0.0909 -0.0976
#> rs1209264 0.2617 -0.1308 0.2617 0.2617 -0.2594
#> rs6427720 rs6427721 rs6427722 rs116710125 rs6427724 rs61812654
#> rs6691345 0.1275 0.1275 0.1275 -0.0066 0.1275 -0.1218
#> rs115165870 0.0499 0.0499 0.0499 -0.0053 0.0499 -0.0471
#> rs12727865 0.0909 0.0909 0.0909 0.0787 0.0909 -0.0976
#> rs147889978 0.0762 0.0762 0.0762 -0.0361 0.0762 -0.0735
#> rs6702754 0.0909 0.0909 0.0909 0.0787 0.0909 -0.0976
#> rs1209264 0.2617 0.2617 0.2617 0.0408 0.2617 -0.2594
#> rs4845645 rs9427076 1:154503342:AT:A rs10752643 rs60498985
#> rs6691345 0.1011 -0.1218 -0.2245 0.1275 -0.1572
#> rs115165870 0.0494 -0.0471 -0.0401 0.0499 -0.0358
#> rs12727865 0.1078 -0.0976 -0.2123 0.0909 -0.1466
#> rs147889978 0.0749 -0.0735 -0.0672 0.0762 -0.0162
#> rs6702754 0.1078 -0.0976 -0.2123 0.0909 -0.1466
#> rs1209264 0.2460 -0.2594 -0.3044 0.2617 -0.1308
#> rs59741504 rs60255122 rs60760897 rs61698846 rs61275241 rs112231452
#> rs6691345 -0.1572 -0.1572 -0.1517 -0.1572 -0.1572 -0.1572
#> rs115165870 -0.0358 -0.0358 -0.0366 -0.0358 -0.0358 -0.0358
#> rs12727865 -0.1466 -0.1466 -0.1499 -0.1466 -0.1466 -0.1466
#> rs147889978 -0.0162 -0.0162 -0.0170 -0.0162 -0.0162 -0.0162
#> rs6702754 -0.1466 -0.1466 -0.1499 -0.1466 -0.1466 -0.1466
#> rs1209264 -0.1308 -0.1308 -0.1291 -0.1308 -0.1308 -0.1308
#> rs61403567 rs10908847 rs58710275 rs77994623 rs12407048 rs139564096
#> rs6691345 -0.1572 0.2339 -0.1572 -0.0256 0.2339 -0.0508
#> rs115165870 -0.0358 0.0692 -0.0358 0.1951 0.0692 0.0724
#> rs12727865 -0.1466 0.1967 -0.1466 0.1043 0.1967 0.0213
#> rs147889978 -0.0162 0.0726 -0.0162 0.2378 0.0726 0.0182
#> rs6702754 -0.1466 0.1967 -0.1466 0.1043 0.1967 0.0213
#> rs1209264 -0.1308 0.3142 -0.1308 0.0989 0.3142 0.0107
#> 1:154505437:A:ACTT rs4638123 1:154505829:GTTT:G rs7551873 rs7556449
#> rs6691345 -0.1572 0.2330 -0.2239 -0.1572 -0.1572
#> rs115165870 -0.0358 0.0687 -0.0518 -0.0358 -0.0358
#> rs12727865 -0.1466 0.1944 -0.1837 -0.1466 -0.1466
#> rs147889978 -0.0162 0.0720 -0.0554 -0.0162 -0.0162
#> rs6702754 -0.1466 0.1944 -0.1837 -0.1466 -0.1466
#> rs1209264 -0.1308 0.3165 -0.2910 -0.1308 -0.1308
#> rs202002227 rs41304075 rs41308419 1:154507318:AG:A rs112585956
#> rs6691345 -0.1177 -0.0647 -0.1572 -0.1218 -0.1572
#> rs115165870 -0.0314 0.0054 -0.0358 -0.0471 -0.0358
#> rs12727865 -0.0231 0.1716 -0.1466 -0.0976 -0.1466
#> rs147889978 -0.0712 -0.0434 -0.0162 -0.0735 -0.0162
#> rs6702754 -0.0231 0.1716 -0.1466 -0.0976 -0.1466
#> rs1209264 -0.2120 0.0273 -0.1308 -0.2594 -0.1308
#> 1:154507845:GA:G rs12037271 rs4633282 rs73023331 rs9427415
#> rs6691345 -0.1189 0.2339 -0.1572 -0.1572 -0.1218
#> rs115165870 -0.0558 0.0692 -0.0358 -0.0358 -0.0471
#> rs12727865 -0.1451 0.1967 -0.1466 -0.1466 -0.0976
#> rs147889978 0.0056 0.0726 -0.0162 -0.0162 -0.0735
#> rs6702754 -0.1451 0.1967 -0.1466 -0.1466 -0.0976
#> rs1209264 -0.1166 0.3142 -0.1308 -0.1308 -0.2594
#> rs111742980 rs112674677 rs113915076 rs4639752 rs147830103 rs4390168
#> rs6691345 -0.1572 -0.1572 -0.1572 -0.1572 -0.1099 -0.1517
#> rs115165870 -0.0358 -0.0358 -0.0358 -0.0358 -0.0757 -0.0366
#> rs12727865 -0.1466 -0.1466 -0.1466 -0.1466 0.1207 -0.1447
#> rs147889978 -0.0162 -0.0162 -0.0162 -0.0162 0.1023 -0.0170
#> rs6702754 -0.1466 -0.1466 -0.1466 -0.1466 0.1207 -0.1447
#> rs1209264 -0.1308 -0.1308 -0.1308 -0.1308 0.0118 -0.1291
#> rs60368585 rs116805289 rs112236096 rs73023339 rs12136771 rs57783436
#> rs6691345 -0.1572 -0.0570 -0.1572 -0.1572 0.2293 -0.1519
#> rs115165870 -0.0358 -0.0064 -0.0358 -0.0358 0.1023 -0.0740
#> rs12727865 -0.1466 0.1595 -0.1466 -0.1466 0.1971 -0.1472
#> rs147889978 -0.0162 0.6627 -0.0162 -0.0162 0.0704 -0.0137
#> rs6702754 -0.1466 0.1595 -0.1466 -0.1466 0.1971 -0.1472
#> rs1209264 -0.1308 0.0452 -0.1308 -0.1308 0.3119 -0.1281
#> rs112394421 rs73023346 rs61811362 rs12408461 rs55908418 rs73023348
#> rs6691345 -0.1519 -0.1519 -0.1218 -0.1537 -0.0547 -0.1519
#> rs115165870 -0.0740 -0.0740 -0.0471 -0.0748 -0.0198 -0.0740
#> rs12727865 -0.1472 -0.1472 -0.0976 -0.1453 -0.1330 -0.1472
#> rs147889978 -0.0137 -0.0137 -0.0735 -0.0145 -0.0357 -0.0137
#> rs6702754 -0.1472 -0.1472 -0.0976 -0.1453 -0.1330 -0.1472
#> rs1209264 -0.1281 -0.1281 -0.2594 -0.1265 0.0983 -0.1281
#> rs73023349 rs72999415 rs11265632 rs72999419 rs41313910 rs41310893
#> rs6691345 -0.1528 -0.1537 0.2293 -0.1519 -0.1537 -0.0873
#> rs115165870 -0.0609 -0.0748 0.1023 -0.0740 -0.0748 -0.0350
#> rs12727865 -0.1445 -0.1453 0.1971 -0.1472 -0.1504 -0.1214
#> rs147889978 -0.0144 -0.0145 0.0704 -0.0137 -0.0145 -0.0658
#> rs6702754 -0.1445 -0.1453 0.1971 -0.1472 -0.1504 -0.1214
#> rs1209264 -0.1258 -0.1265 0.3119 -0.1281 -0.1265 -0.3772
#> rs4845647 rs4845648 rs72999422 rs76289529 rs12750774 rs3811448
#> rs6691345 0.2293 -0.1218 -0.1519 0.2432 -0.0502 -0.1519
#> rs115165870 0.1023 -0.0471 -0.0740 0.0625 -0.0473 -0.0740
#> rs12727865 0.1971 -0.0976 -0.1472 -0.0626 0.1828 -0.1472
#> rs147889978 0.0704 -0.0735 -0.0137 -0.0679 -0.0658 -0.0137
#> rs6702754 0.1971 -0.0976 -0.1472 -0.0626 0.1828 -0.1472
#> rs1209264 0.3119 -0.2594 -0.1281 0.0931 0.1643 -0.1281
#> rs6681207 rs3811449 rs115697580 1:154518247:CTT:C rs59084843
#> rs6691345 -0.1502 -0.1519 -0.0646 -0.1684 -0.1519
#> rs115165870 -0.0731 -0.0740 -0.0428 -0.0686 -0.0740
#> rs12727865 -0.1439 -0.1472 -0.0777 -0.1038 -0.1472
#> rs147889978 -0.0128 -0.0137 -0.0421 -0.0226 -0.0137
#> rs6702754 -0.1439 -0.1472 -0.0777 -0.1038 -0.1472
#> rs1209264 -0.1298 -0.1281 -0.3496 -0.1157 -0.1281
#> rs61559765 rs60092776 rs4382717 rs60931472 1:154518864:TAA:T
#> rs6691345 -0.1519 -0.1519 0.2249 -0.1464 -0.1495
#> rs115165870 -0.0740 -0.0740 0.1032 -0.0748 -0.0830
#> rs12727865 -0.1472 -0.1472 0.1958 -0.1453 -0.1336
#> rs147889978 -0.0137 -0.0137 0.0712 -0.0145 -0.0086
#> rs6702754 -0.1472 -0.1472 0.1958 -0.1453 -0.1336
#> rs1209264 -0.1281 -0.1281 0.3109 -0.1265 -0.0926
#> rs6427729 rs147968970 1:154519800:C:CA rs41269915 rs11265634
#> rs6691345 0.1275 -0.0234 -0.1482 -0.1464 0.1291
#> rs115165870 0.0499 0.0920 -0.0757 -0.0748 -0.0016
#> rs12727865 0.0909 -0.0032 -0.1485 -0.1453 0.0915
#> rs147889978 0.0762 0.0007 -0.0154 -0.0145 0.0691
#> rs6702754 0.0909 -0.0032 -0.1485 -0.1453 0.0915
#> rs1209264 0.2617 -0.0418 -0.1248 -0.1265 0.2733
#> rs72698179 rs9427082 rs12144146 rs41302545 rs7539745 rs7543174
#> rs6691345 -0.0519 -0.1218 -0.0458 -0.1218 0.1275 0.1244
#> rs115165870 -0.0110 -0.0471 -0.0454 -0.0471 0.0499 -0.0045
#> rs12727865 -0.1372 -0.0976 0.1897 -0.0976 0.0909 0.0929
#> rs147889978 0.0228 -0.0735 -0.0642 -0.0735 0.0762 0.0669
#> rs6702754 -0.1372 -0.0976 0.1897 -0.0976 0.0909 0.0929
#> rs1209264 0.0857 -0.2594 0.1618 -0.2594 0.2617 0.2643
#> rs56047170 rs7550664 rs7553602 1:154531090:TCCG:T
#> rs6691345 -0.1155 -0.1199 -0.1117 0.1222
#> rs115165870 -0.0396 -0.0462 -0.0308 0.0546
#> rs12727865 -0.1025 -0.0998 -0.1057 0.1069
#> rs147889978 -0.0831 -0.0727 -0.0727 0.0661
#> rs6702754 -0.1025 -0.0998 -0.1057 0.1069
#> rs1209264 -0.2672 -0.2615 -0.2615 0.2281
#> 1:154531232:CCCTCCT:C rs4074436 rs4076089
#> rs6691345 -0.0557 0.0708 0.0330
#> rs115165870 0.0126 -0.0350 -0.1629
#> rs12727865 0.0278 0.1349 -0.0143
#> rs147889978 -0.0401 0.0337 -0.0104
#> rs6702754 0.0278 0.1349 -0.0143
#> rs1209264 -0.1339 -0.0571 0.0647
#> 1:154532595:ATATATATATATATATTTATTTATT:A rs4845649 rs72698182
#> rs6691345 0.1483 0.0708 -0.0648
#> rs115165870 -0.0288 -0.0350 -0.0198
#> rs12727865 0.0708 0.1349 -0.1402
#> rs147889978 0.0590 0.0337 -0.0357
#> rs6702754 0.0708 0.1349 -0.1402
#> rs1209264 0.3895 -0.0571 0.0983
#> rs149551556 rs6686197 rs9427089 1:154535000:T:TA rs56670270
#> rs6691345 -0.0194 0.0330 0.0330 -0.0661 -0.0433
#> rs115165870 -0.0358 -0.1629 -0.1629 -0.0254 0.1459
#> rs12727865 0.0000 -0.0143 -0.0143 -0.1322 0.0448
#> rs147889978 -0.0352 -0.0104 -0.0104 -0.0409 0.0037
#> rs6702754 0.0000 -0.0143 -0.0143 -0.1322 0.0448
#> rs1209264 0.0675 0.0647 0.0647 0.0764 -0.0759
#> rs4845651 1:154535633:TA:T rs6427741 rs150681049 rs185109973
#> rs6691345 0.0526 0.0816 -0.0638 -0.0611 0.2807
#> rs115165870 -0.1316 -0.0289 -0.0243 -0.0516 -0.0445
#> rs12727865 -0.0547 0.1072 -0.1352 -0.0503 -0.0695
#> rs147889978 0.0022 0.0388 -0.0399 -0.0074 -0.0437
#> rs6702754 -0.0547 0.1072 -0.1352 -0.0503 -0.0695
#> rs1209264 0.0606 -0.0570 0.0850 0.0251 0.0099
#> rs6427743 1:154536909:C:CT 1:154537263:CTT:C rs61811370 rs61811371
#> rs6691345 0.0526 0.0278 -0.0148 -0.0638 -0.0638
#> rs115165870 -0.1316 -0.0364 0.0423 -0.0243 -0.0243
#> rs12727865 -0.0547 0.1729 0.1711 -0.1352 -0.1352
#> rs147889978 0.0022 0.0623 -0.0070 -0.0399 -0.0399
#> rs6702754 -0.0547 0.1729 0.1711 -0.1352 -0.1352
#> rs1209264 0.0606 -0.0362 0.0480 0.0850 0.0850
#> rs4845652 rs6660775 rs67860750 rs78038982 rs71651696 rs2280781
#> rs6691345 -0.0616 -0.0638 -0.0190 -0.0611 0.0193 -0.0616
#> rs115165870 -0.0232 -0.0243 -0.0047 -0.0516 -0.0627 -0.0232
#> rs12727865 -0.1382 -0.1352 0.1941 -0.0503 0.0288 -0.1382
#> rs147889978 -0.0388 -0.0399 -0.0708 -0.0074 -0.0099 -0.0388
#> rs6702754 -0.1382 -0.1352 0.1941 -0.0503 0.0288 -0.1382
#> rs1209264 0.0830 0.0850 0.0554 0.0251 0.0099 0.0830
#> 1:154540744:CAG:C rs147483024 rs138398618 rs8192484 rs61811372
#> rs6691345 -0.0611 -0.0799 0.0944 -0.0493 -0.0638
#> rs115165870 0.0765 -0.0213 -0.0008 -0.0250 -0.0243
#> rs12727865 -0.0828 -0.0398 -0.0529 0.0242 -0.1423
#> rs147889978 0.0359 -0.0563 0.0006 -0.0235 -0.0399
#> rs6702754 -0.0828 -0.0398 -0.0529 0.0242 -0.1423
#> rs1209264 0.0010 -0.3589 0.0099 0.0735 0.0850
#> rs4845378 rs78794625 rs12072348 rs2072659 rs2072660 rs2072661
#> rs6691345 -0.0544 -0.0433 -0.0682 -0.0736 0.1160 -0.0901
#> rs115165870 -0.0245 0.0980 0.0062 0.1838 -0.0918 0.0808
#> rs12727865 -0.1294 0.0266 -0.0664 -0.0066 -0.2490 0.2399
#> rs147889978 -0.0403 0.0037 -0.0239 0.1906 -0.1288 0.1312
#> rs6702754 -0.1294 0.0266 -0.0664 -0.0066 -0.2490 0.2399
#> rs1209264 0.0859 -0.1029 0.1286 0.0512 -0.0934 0.0946
#> rs4292956 rs45490696 rs12130403 rs139826441 1:154550062:GCA:G
#> rs6691345 -0.0220 -0.0316 -0.0379 -0.0383 -0.0250
#> rs115165870 0.2501 0.2531 0.0881 0.1045 0.2471
#> rs12727865 0.0780 0.0842 0.1326 0.0584 0.0719
#> rs147889978 0.3046 0.3079 0.0850 0.0069 0.3013
#> rs6702754 0.0780 0.0842 0.1326 0.0584 0.0719
#> rs1209264 0.0854 0.0831 0.0674 -0.0565 0.0877
#> rs6680410 1:154550943:CAG:C rs3811450 rs4845653
#> rs6691345 -0.0250 -0.0851 -0.0220 -0.0869
#> rs115165870 0.2471 0.0766 0.2501 -0.0028
#> rs12727865 0.0719 0.1770 0.0691 -0.1592
#> rs147889978 0.3013 0.0989 0.3046 0.0180
#> rs6702754 0.0719 0.1770 0.0691 -0.1592
#> rs1209264 0.0877 0.1035 0.0854 0.1147